Page Comparison

• Install LaTeX and the extensions required to run Rd2pdf

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# Linux
sudo apt-get install texlive-latex-base
sudo apt-get install texinfo
sudo apt-get install texlive-fonts-extra

Creating client-side DataSHIELD package manuals

• On the client: Run R to check where datashield is installed on your machine using .libPaths() in R.

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# Example paths in R client-side in Linux
> .libPaths()
[1] "/home/rw13742/R/x86_64-pc-linux-gnu-library/3.1"
[2] "/usr/local/lib/R/site-library"                  
[3] "/usr/lib/R/site-library"                        
[4] "/usr/lib/R/library"      

• Navigate to the appropriate folder Datashield R library is held and run Rd2pdf to create pdf manual of each package

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# Linux
cd /home/rw13742/R/x86_64-pc-linux-gnu-library/3.1
R CMD Rd2pdf PACKAGENAME

Creating DataSHIELD server-side package manuals

• Server-side all datashield packages sit in

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/var/lib/rserver/R/i686-pc-linux-gnu-library/3.1

• Navigate to the appropriate folder Datashield R library is held and run Rd2pdf to create pdf manual of each package

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# Linux
cd /home/rw13742/R/x86_64-pc-linux-gnu-library/3.1
R CMD Rd2pdf PACKAGENAME

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devtools::build_manual()